In sweetpotato (Ipomoea batatas L.), the sink strength of developing adventitious roots limits storage root formation. Sucrose synthase (SuSy) has been identified as a marker for sink strength in developing storage roots. In model systems, declining nitrogen (N) availability has been associated with increased carbohydrate allocation to root systems. To test the hypothesis that N limitation triggers increased SuSy activity that leads to storage root formation, we subjected sweetpotato cv. ‘Beauregard’ to progressively declining N treatments in a split-root system. SuSy expression and root system architecture were evaluated over 15 days, and storage root formation was assessed at 50 days. Declining N availability enhanced SuSy activity in the root base tissue across all time points and was associated with increased lateral root count at 15 days. Previous work has shown that the anatomical cue of the onset of storage root formation, the appearance of anomalous cambia, is initially limited to the root base tissue. The omission of N was associated with decreased root base SuSy activity and an overall reduction in root architectural attributes. These data support the hypothesis that declining N could be a critical switch for storage root formation in sweetpotato. Our findings have profound implications for increasing N fertilizer efficiency and enhancing our understanding of the intrinsic and environmental variables that mediate storage root formation and productivity in this globally important crop.